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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6008568 chr22:46695549 A/G DNAL4 chr22:39174513-39190203:- 0.59 6.06 2.71E-9 Box Plot
THCA rs6008568 chr22:46695549 A/G HSCB chr22:29138019-29153503:+ 0.51 5.91 6.6E-9 Box Plot
THCA rs6008568 chr22:46695549 A/G KLHL22 chr22:20795806-20850170:- 0.57 6.03 3.27E-9 Box Plot
THCA rs6008568 chr22:46695549 A/G LOC284900 chr22:28315364-28404267:+ 0.46 5.89 7.42E-9 Box Plot
THCA rs6008568 chr22:46695549 A/G MCAT chr22:43528212-43539400:- 0.49 6.26 8.5E-10 Box Plot
THCA rs6008568 chr22:46695549 A/G NOL12 chr22:38077680-38089485:+ 0.44 5.98 4.35E-9 Box Plot
THCA rs6008568 chr22:46695549 A/G PICK1 chr22:38452318-38471708:+ 0.59 6.35 5.1E-10 Box Plot
THCA rs6008568 chr22:46695549 A/G POLR3H chr22:41921808-41940610:- 0.66 6.67 7.15E-11 Box Plot
THCA rs6008568 chr22:46695549 A/G RBM9 chr22:36134784-36424585:- 0.44 6.07 2.58E-9 Box Plot
THCA rs6008568 chr22:46695549 A/G RNF215 chr22:30764800-30817760:- 0.54 5.91 6.33E-9 Box Plot
THCA rs6008568 chr22:46695549 A/G SGSM3 chr22:40766595-40806293:+ 0.49 6.16 1.59E-9 Box Plot
THCA rs6008568 chr22:46695549 A/G SMCR7L chr22:39896105-39914136:+ 0.54 6.32 6.0E-10 Box Plot
THCA rs6008568 chr22:46695549 A/G TMEM184B chr22:38615298-38669040:- 0.46 5.88 7.73E-9 Box Plot
THCA rs6008568 chr22:46695549 A/G TUBGCP6 chr22:50656118-50683421:- 0.46 6.25 9.02E-10 Box Plot
THCA rs6008568 chr22:46695549 A/G TUG1 chr22:31366663-31375381:+ 0.57 6.24 9.72E-10 Box Plot